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1

Modeling of acanthoxin A1, a PLA2 enzyme from the venom of the common death adder (Acanthophis antarcticus)

Peter G. Hains, Paul A. Ramsland, Kevin W. Broady

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1999

Language:

english

File:

PDF, 501 KB

english, 1999

2

Virucidal activity of the dendrimer microbicide SPL7013 against HIV-1

Sushama Telwatte, Katie Moore, Adam Johnson, David Tyssen, Jasminka Sterjovski, Muriel Aldunate, Paul R. Gorry, Paul A. Ramsland, Gareth R. Lewis, Jeremy R.A. Paull, Secondo Sonza, Gilda Tachedjian

Journal:

Antiviral Research

Year:

2011

Language:

english

File:

PDF, 500 KB

english, 2011

3

Latest developments in molecular docking: 2010-2011 in review

Yuriev, Elizabeth, Ramsland, Paul A.

Journal:

Journal of Molecular Recognition

Year:

2013

Language:

english

File:

PDF, 936 KB

english, 2013

4

Improvements, trends, and new ideas in molecular docking: 2012-2013 in review

Yuriev, Elizabeth, Holien, Jessica, Ramsland, Paul A.

Journal:

Journal of Molecular Recognition

Year:

2015

Language:

english

File:

PDF, 350 KB

english, 2015

5

Antibody recognition of aberrant glycosylation on the surface of cancer cells

Soliman, Caroline, Yuriev, Elizabeth, Ramsland, Paul A

Journal:

Current Opinion in Structural Biology

Year:

2017

Language:

english

File:

PDF, 1.37 MB

english, 2017

6

Comparison of the three-dimensional structures of a humanized and a chimeric Fab of an anti-γ-interferon antibody

Zhao-chang Fan, Lin Shan, Benjamin Z. Goldsteen, Luke W. Guddat, Archana Thakur, Nicholas F. Landolfi, Man Sung Co, Maximiliano Vasquez, Cary Queen, Paul A. Ramsland, Allen B. Edmundson

Journal:

Journal of Molecular Recognition

Year:

1999

Language:

english

File:

PDF, 1.64 MB

english, 1999

7

Interference of rheumatoid factor activity by aspartame, a dipeptide methyl ester

Paul A. Ramsland, Bahereh F. Movafagh, Morris Reichlin, Allen B. Edmundson

Journal:

Journal of Molecular Recognition

Year:

1999

Language:

english

File:

PDF, 448 KB

english, 1999

8

Binding of nascent collagen by amyloidogenic light chains and amyloid fibrillogenesis in monolayers of human fibrocytes

Debra L. Harris, Edward King, Paul A. Ramsland, Allen B. Edmundson

Journal:

Journal of Molecular Recognition

Year:

2000

Language:

english

File:

PDF, 1.15 MB

english, 2000

9

Peptide inhibitors of xenoreactive antibodies mimic the interaction profile of the native carbohydrate antigens

Mark Agostino, Mauro S. Sandrin, Philip E. Thompson, Paul A. Ramsland, Elizabeth Yuriev

Journal:

Year:

2011

Language:

english

File:

PDF, 3.29 MB

english, 2011

10

ChemInform Abstract: Molecular Docking of Carbohydrate Ligands to Antibodies: Structural Validation Against Crystal Structures.

Mark Agostino, Cassandra Jene, Tristan Boyle, Paul A. Ramsland, Elizabeth Yuriev

Journal:

Year:

2010

File:

PDF, 15 KB

2010

11

Challenges and advances in computational docking: 2009 in review

Elizabeth Yuriev, Mark Agostino, Paul A. Ramsland

Journal:

Journal of Molecular Recognition

Year:

2011

Language:

english

File:

PDF, 258 KB

english, 2011

12

Docking of combinatorial peptide libraries into a broadly cross-reactive human IgM

Elizabeth Yuriev, Paul A. Ramsland, Allen B. Edmundson

Journal:

Journal of Molecular Recognition

Year:

2001

Language:

english

File:

PDF, 605 KB

english, 2001

13

Binding of synthetic peptides by a human monoclonal IgM with an unusual combining site structure

Allen B. Edmundson, Gordon Tribbick, Sonja Plompen, H. Mario Geysen, Elizabeth Yuriev, Paul A. Ramsland

Journal:

Journal of Molecular Recognition

Year:

2001

Language:

english

File:

PDF, 294 KB

english, 2001

14

Structure and function relationships in proteins: a tribute to Allen B. Edmundson

Paul A. Ramsland

Journal:

Journal of Molecular Recognition

Year:

2002

Language:

english

File:

PDF, 65 KB

english, 2002

15

Crystal structures of human antibodies: a detailed and unfinished tapestry of immunoglobulin gene products

Paul A. Ramsland, William Farrugia

Journal:

Journal of Molecular Recognition

Year:

2002

Language:

english

File:

PDF, 388 KB

english, 2002

16

Dealing with intractable protein cores: protein sequencing of the Mcg IgG and the Yvo IgM heavy chain variable domains

Denis C. Shaw, Brandon B. Shultz, Paul A. Ramsland, Allen B. Edmundson

Journal:

Journal of Molecular Recognition

Year:

2002

Language:

english

File:

PDF, 128 KB

english, 2002

17

Mcg light chain dimer as a model system for ligand design: a docking study

Elizabeth Yuriev, Paul A. Ramsland

Journal:

Journal of Molecular Recognition

Year:

2002

Language:

english

File:

PDF, 235 KB

english, 2002

18

Comparison of the three-dimensional structures of a human Bence-Jones dimer crystallized on Earth and aboard US Space Shuttle Mission STS-95

Simon S. Terzyan, Christina R. Bourne, Paul A. Ramsland, Philip C. Bourne, Allen B. Edmundson

Journal:

Journal of Molecular Recognition

Year:

2003

Language:

english

File:

PDF, 592 KB

english, 2003

19

Recombinant shark natural antibodies to thyroglobulin

Samuel F. Schluter, Ingvill Jensen, Paul A. Ramsland, John J. Marchalonis

Journal:

Journal of Molecular Recognition

Year:

2005

Language:

english

File:

PDF, 4.71 MB

english, 2005

20

Dissimilar aggregation processes govern precipitation and gelation of human IgM cryoglobulins

Vicky Vallas, William Farrugia, Robert L. Raison, Allen B. Edmundson, Paul A. Ramsland

Journal:

Journal of Molecular Recognition

Year:

2007

Language:

english

File:

PDF, 149 KB

english, 2007

21

Interconversion of different crystal forms of Fabs from human IgM cryoglobulins

Paul A. Ramsland, Jadee L. Upshaw, Brandon B. Shultz, Christina R. DeWitt, William F. Chissoe III, Robert L. Raison, Allen B. Edmundson

Journal:

Journal of Crystal Growth

Year:

2001

Language:

english

File:

PDF, 494 KB

english, 2001

22

Packing motifs as predictors of the propensity of antibody fragments to crystallize

Allen B Edmundson, Christina R DeWitt, Benjamin Z Goldsteen, Paul A Ramsland

Journal:

Journal of Crystal Growth

Year:

1999

Language:

english

File:

PDF, 534 KB

english, 1999

23

Conformational alterations in the CD4 binding cavity of HIV-1 gp120 influencing gp120-CD4 interactions and fusogenicity of HIV-1 envelopes derived from brain and other tissues

Lachlan Gray, Jasminka Sterjovski, Paul A Ramsland, Melissa J Churchill, Paul R Gorry

Journal:

Year:

2011

Language:

english

File:

PDF, 5.39 MB

english, 2011

24

Structure of human aldose reductase holoenzyme in complex with Statil: An approach to structure-based inhibitor design of the enzyme

Ossama El-Kabbani, Paul Ramsland, Connie Darmanin, Roland P.-T. Chung, Alberto Podjarny

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 511 KB

english, 2003

25

Enhanced major histocompatibility complex class I binding and immune responses through anchor modification of the non-canonical tumour-associated mucin 1-8 peptide

Eliada Lazoura, Jodie Lodding, William Farrugia, Paul A. Ramsland, James Stevens, Ian A. Wilson, Geoffrey A. Pietersz, Vasso Apostolopoulos

Journal:

Year:

2006

Language:

english

File:

PDF, 536 KB

english, 2006

26

Altered peptide ligands of myelin basic protein (MBP87–99) conjugated to reduced mannan modulate immune responses in mice

Maria Katsara, Elizabeth Yuriev, Paul A. Ramsland, Theodore Tselios, George Deraos, Athanasios Lourbopoulos, Nikolaos Grigoriadis, John Matsoukas, Vasso Apostolopoulos

Journal:

Year:

2009

Language:

english

File:

PDF, 463 KB

english, 2009

27

Three-dimensional structures of carbohydrate determinants of Lewis system antigens: Implications for effective antibody targeting of cancer

Yuriev, Elizabeth, Farrugia, William, Scott, Andrew M, Ramsland, Paul A

Journal:

Immunology & Cell Biology

Year:

2005

Language:

english

File:

PDF, 625 KB

english, 2005

28

Blood brothers: Carbohydrates in xenotransplantation and cancer immunotherapy

Ramsland, Paul A

Journal:

Immunology & Cell Biology

Year:

2005

Language:

english

File:

PDF, 54 KB

english, 2005

29

Reply to ‘Response to Milland et al.: Carbohydrate residues downstream of the terminal galα(1,3)gal epitope modulate the specificity of xenoreactive antibodies’

Milland, Julie, Yuriev, Elizabeth, Xing, Pei-Xiang, McKenzie, Ian F C, Ramsland, Paul A, Christiansen, Dale, Sandrin, Mauro S

Journal:

Immunology & Cell Biology

Year:

2008

Language:

english

File:

PDF, 60 KB

english, 2008

30

Inhibition of destructive autoimmune arthritis in FcγRIIa transgenic mice by small chemical entities

Pietersz, Geoffrey A, Mottram, Patricia L, van de Velde, Nicholas C, Sardjono, Caroline Tan, Esparon, Sandra, Ramsland, Paul A, Moloney, Gerard, Baell, Jonathan B, McCarthy, Tom D, Matthews, Barry R

Journal:

Immunology & Cell Biology

Year:

2008

Language:

english

File:

PDF, 696 KB

english, 2008

31

Carbohydrate residues downstream of the terminal Galα(1,3)Gal epitope modulate the specificity of xenoreactive antibodies

Milland, Julie, Yuriev, Elizabeth, Xing, Pei-Xiang, McKenzie, Ian F C, Ramsland, Paul A, Sandrin, Mauro S

Journal:

Immunology & Cell Biology

Year:

2007

Language:

english

File:

PDF, 391 KB

english, 2007

32

Diverse binding site structures revealed in homology models of polyreactive immunoglobulins

Paul A. Ramsland, Luke W. Guddat, Allen B. Edmundson, Robert L. Raison

Journal:

Journal of Computer-Aided Molecular Design

Year:

1997

Language:

english

File:

PDF, 348 KB

english, 1997

33

A double mutation of MBP83–99 peptide induces IL-4 responses and antagonizes IFN-γ responses

Maria Katsara, Elizabeth Yuriev, Paul A. Ramsland, George Deraos, Theodore Tselios, John Matsoukas, Vasso Apostolopoulos

Journal:

Journal of Neuroimmunology

Year:

2008

Language:

english

File:

PDF, 2.24 MB

english, 2008

34

Characterization of a unique conformational epitope on free immunoglobulin kappa light chains that is recognized by an antibody with therapeutic potential

Andrew T. Hutchinson, Ralitza Alexova, Vanessa Bockhorni, Paul A. Ramsland, Darren R. Jones, Cameron V. Jennings, Kevin Broady, Allen B. Edmundson, Robert L. Raison

Journal:

Molecular Immunology

Year:

2011

Language:

english

File:

PDF, 933 KB

english, 2011

35

CD4-binding site alterations in CCR5-using HIV-1 envelopes influencing gp120–CD4 interactions and fusogenicity

Jasminka Sterjovski, Melissa J. Churchill, Michael Roche, Anne Ellett, William Farrugia, Steven L. Wesselingh, Anthony L. Cunningham, Paul A. Ramsland, Paul R. Gorry

Journal:

Year:

2011

Language:

english

File:

PDF, 2.05 MB

english, 2011

36

Molecular Docking of Carbohydrate Ligands to Antibodies: Structural Validation against Crystal Structures

Agostino, Mark, Jene, Cassandra, Boyle, Tristan, Ramsland, Paul A., Yuriev, Elizabeth

Journal:

Journal of Chemical Information and Modeling

Year:

2009

Language:

english

File:

PDF, 4.14 MB

english, 2009

37

The three-dimensional structure of a complex of a murine Fab (NC10.14) with a potent sweetener (NC174): an illustration of structural diversity in antigen recognition by immunoglobulins

Luke W. Guddat, Lin Shan, Christopher Broomell, Paul A. Ramsland, Zhao-chang Fan, Jerry M. Anchin, D.Scott Linthicum, Allen B. Edmundson

Journal:

Journal of Molecular Biology

Year:

2000

Language:

english

File:

PDF, 794 KB

english, 2000

38

The antibody repertoire in evolution: Chance, selection, and continuity

John J. Marchalonis, Miranda K. Adelman, Samuel F. Schluter, Paul A. Ramsland

Journal:

Developmental & Comparative Immunology

Year:

2006

Language:

english

File:

PDF, 985 KB

english, 2006

39

Three-dimensional Structures of Idiotypically Related Fabs with Intermediate and High Affinity for Fluorescein

Simon Terzyan, Paul A. Ramsland, Edward W. Voss Jr, James N. Herron, Allen B. Edmundson

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 534 KB

english, 2004

40

Structural Convergence of Antibody Binding of Carbohydrate Determinants in Lewis Y Tumor Antigens

Paul A Ramsland, William Farrugia, Tessa M Bradford, P Mark Hogarth, Andrew M Scott

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 1.02 MB

english, 2004

41

Two monoclonal antibodies to precisely the same epitope of type II collagen select non-crossreactive phage clones by phage display: implications for autoimmunity and molecular mimicry

Yuekang Xu, Paul A. Ramsland, Janet M. Davies, Marita Scealy, Kutty Selva Nandakumar, Rikard Holmdahl, Merrill J. Rowley

Journal:

Molecular Immunology

Year:

2004

Language:

english

File:

PDF, 154 KB

english, 2004

42

An FcγRIIa-binding peptide that mimics the interaction between FcγRIIa and IgG

Angela C. Cendron, Bruce D. Wines, Robert T.C. Brownlee, Paul A. Ramsland, Geoffrey A. Pietersz, P. Mark Hogarth

Journal:

Molecular Immunology

Year:

2008

Language:

english

File:

PDF, 935 KB

english, 2008

43

Mannosylation of mutated MBP83–99 peptides diverts immune responses from Th1 to Th2

Maria Katsara, Elizabeth Yuriev, Paul A. Ramsland, George Deraos, Theodore Tselios, John Matsoukas, Vasso Apostolopoulos

Journal:

Molecular Immunology

Year:

2008

Language:

english

File:

PDF, 989 KB

english, 2008

44

Non-canonical anchor motif peptides bound to MHC class I induce cellular responses

Eliada Lazoura, Jodie Lodding, William Farrugia, Stephanie Day, Paul A. Ramsland, Vasso Apostolopoulos

Journal:

Molecular Immunology

Year:

2009

Language:

english

File:

PDF, 851 KB

english, 2009

45

In silico analysis of antibody–carbohydrate interactions and its application to xenoreactive antibodies

Mark Agostino, Mauro S. Sandrin, Philip E. Thompson, Elizabeth Yuriev, Paul A. Ramsland

Journal:

Molecular Immunology

Year:

2009

Language:

english

File:

PDF, 1.63 MB

english, 2009

46

Construction of single-chain Fv with two possible CDR3H conformations but similar inter-molecular forces that neutralize bovine herpesvirus 1

Madhuri Koti, William Farrugia, Eva Nagy, Paul A. Ramsland, Azad K. Kaushik

Journal:

Molecular Immunology

Year:

2010

Language:

english

File:

PDF, 1.52 MB

english, 2010

47

Structural elements of primary CCR5-using HIV-1 gp120 proteins influencing sensitivity and resistance to the broadly neutralizing monoclonal antibody b12

Jasminka Sterjovski, Melissa J. Churchill, Anne Ellett, Steve L. Wesselingh, Paul A. Ramsland, Paul R. Gorry

Journal:

Year:

2012

Language:

english

File:

PDF, 1.69 MB

english, 2012

48

Identification of a homologue of CD59 in a cyclostome: implications for the evolutionary development of the complement system

Nicholas J.dos Remedios, Paul A. Ramsland, Jeffrey W. Hook, Robert L. Raison

Journal:

Developmental & Comparative Immunology

Year:

1999

Language:

english

File:

PDF, 1.39 MB

english, 1999

49

An unusual human IgM antibody with a protruding HCDR3 and high avidity for its peptide ligands

Paul A. Ramsland, Lin Shan, Carolyn R. Moomaw, Clive A. Slaughter, Zhao-Chang Fan, Luke W. Guddat, Allen B. Edmundson

Journal:

Molecular Immunology

Year:

2000

Language:

english

File:

PDF, 1.07 MB

english, 2000

50

Structural analysis of IgG2A monoclonal antibodies in relation to complement deposition and renal immune complex deposition

Melva L. Gonzalez, Mark Barton Frank, Paul A. Ramsland, Jay S. Hanas, Frank J. Waxman

Journal:

Molecular Immunology

Year:

2003

Language:

english

File:

PDF, 221 KB

english, 2003

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